Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924957.1_cds_XP_016473224.1_65375
CDS Infomation

[gene=LOC107795155] [db_xref=GeneID:107795155] [protein=pentatricopeptide repeat-containing protein At5g47360-like] [protein_id=XP_016473224.1] [location=99458..100903] [gbkey=CDS]
Sequence

ATGCTTCCTCTATCAATCTCTCGCCTTTTCTTGAAGACCAATTCAGCCAATGAGCCAATT
TTTTTACTCAAGAAGGTCCTTTTATTCACCACTTGTTCATCATCAGCTGGAGAATTTTTG
GGTCATTTGCTGAAAAATAAAAATGGGTCTGGTATGGAGAAGACTCTGAACACAGTTAAG
GCTAAACTAGATGCTAAATGTGTTAATGAAGTATTAGAGAAATGCGCCGTTGATGATCCT
CAAATGGGTCTCAGATTCTTCATTTGGGCTGGACTTCATCCCAGTTATAGACACAGCAGT
TACATGTTTAGTAGAGCTTATAAACTTCTCGGATTTGATCGCAAACCACGAATTATTCAA
GATGTCATTGAGGTTTATAGGCTGCAGAATAATTATGTTCCAAGTGCTAGGATGTTTAAG
GTTATTTTGAATTTGTGTAGAGAGGGAAAAGATGCTAACTTAGGCTTGTGGGTGTTGTGG
AAAATGAAAGAGTTGAATTGTAGGCCGGATACGACAGTGTATAATGTAGTTATTCGATTA
TTATGTGAGAAAGGTGTTATGGATGAAGCAATGGGTTTGATGAAAGAGATGGATTTGATT
GATCTTCATCCTGATATGATCACTTATGTTGTGTTGATTAAAGGGTTGTCTGAGGTGGGT
AGGTTGGAAGAAGCTTGTGGATTAACCAAAGCTATGAGGGGACATGGATGCGTGCCAAAT
ACGGTGACCTATTCAGCTCTTCTTGACGGGATTTGTAGGTTCGGGAGTTTGGAAAGGGCG
CTTGAGTTATTGAGAGAAATGGAAAAAGATGGTGGGCAGTGTAAGCCCAACGTCGTTACT
TATACTACTGTGGTTCAAAATTTTGTTGAGAAAGGTCAGTCGATAGAGGCATTAAGTATT
TTGGACCAAATGAGGGATTTTGGTTGTAAACCAAATAGGGTGTTTATCTGTACTTTGATT
CAGGGTCTTTGCAAAGATGGGCATATGGAGGAAGCGCATAAAGTCATCAACAGAGTAGCT
GAAACTGGTATTCCATATGATTCTTGTTACAGTTTTCTAGTTTTATCACTGTTTCGGATT
GGAAAACTCAAGGAGGCAGAAATGTGTTTTAGGAGAATGTTGGCTGGTGGCCTAAAGCCT
GATGGTTTGACCTCAAGCACAATAATGAGATGGCTTTGTCAGCAGAGAAGGATACTTGAT
GGATATCACTTGATTGACGCGATTGAGCAGTCTGCAGGCGTATCTTCTATAGATTCTGAT
ATTTATTCTATACTTATGGCTGGACTATGTGAGGAAAATCATCTTGTTGAAGCTGCAAAG
CTTGCTAGTCTAATGGTAGGGAAAGGAATTCAGCTTAAAGGTCCTTGTACTAAGAATGTA
ATTGAATGTCTTAGACGTTGTGGCAAAGAAGATTTAGCTTCAAGCATTGGTAGTATTAAG
TGCTGA

Peptide Sequence

PEP ID

XP_016473224.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g47360-like [Nicotiana tabacum]
Sequence

MLPLSISRLFLKTNSANEPIFLLKKVLLFTTCSSSAGEFLGHLLKNKNGSGMEKTLNTVK
AKLDAKCVNEVLEKCAVDDPQMGLRFFIWAGLHPSYRHSSYMFSRAYKLLGFDRKPRIIQ
DVIEVYRLQNNYVPSARMFKVILNLCREGKDANLGLWVLWKMKELNCRPDTTVYNVVIRL
LCEKGVMDEAMGLMKEMDLIDLHPDMITYVVLIKGLSEVGRLEEACGLTKAMRGHGCVPN
TVTYSALLDGICRFGSLERALELLREMEKDGGQCKPNVVTYTTVVQNFVEKGQSIEALSI
LDQMRDFGCKPNRVFICTLIQGLCKDGHMEEAHKVINRVAETGIPYDSCYSFLVLSLFRI
GKLKEAEMCFRRMLAGGLKPDGLTSSTIMRWLCQQRRILDGYHLIDAIEQSAGVSSIDSD
IYSILMAGLCEENHLVEAAKLASLMVGKGIQLKGPCTKNVIECLRRCGKEDLASSIGSIK
C

Transcript Sequence

Gene sequence data has not been registered.